| 1 | | Universidad Mexicana de Educación a Distancia | Morelos | Medicine | 82 | 90.734 | 231 | 434 |
| 2 | | Instituto Nacional de Salud Pública | Morelos | Medicine | 71 | 29.825 | 152 | 243 |
| 3 | | Universidad Autónoma del Estado de Morelos | Morelos | Mathematics | 70 | 17.490 | 354 | 518 |
| 4 | | Instituto Nacional de Salud Pública | Morelos | Environmental Science | 67 | 20.292 | 270 | 691 |
| 5 | | Instituto Nacional de Salud Pública | Morelos | Health Professions | 65 | 162.994 | 93 | 127 |
| 6 | | Universidad Autónoma del Estado de Morelos | Morelos | Biochemistry, Genetics and Molecular Biology | 65 | 16.628 | 196 | 317 |
| 7 | | Universidad Autónoma del Estado de Morelos | Morelos | Biochemistry, Genetics and Molecular Biology | 65 | 14.859 | 284 | 436 |
| 8 | | Universidad Autónoma del Estado de Morelos | Morelos | Biochemistry, Genetics and Molecular Biology | 60 | 14.677 | 176 | 290 |
| 9 | | Instituto Nacional de Salud Pública | Morelos | Medicine | 50 | 29.176 | 110 | 183 |
| 10 | | Universidad Autónoma del Estado de Morelos | Morelos | Biochemistry, Genetics and Molecular Biology | 50 | 8.246 | 98 | 173 |
| 11 | | Universidad Autónoma del Estado de Morelos | Morelos | Materials Science | 50 | 7.581 | 158 | 274 |
| 12 | | Universidad Autónoma del Estado de Morelos | Morelos | Biochemistry, Genetics and Molecular Biology | 50 | 7.176 | 109 | 181 |
| 13 | | Instituto Nacional de Salud Pública | Morelos | Health Professions | 49 | 14.049 | 156 | 328 |
| 14 | | Universidad Autónoma del Estado de Morelos | Morelos | Chemistry | 48 | 12.695 | 118 | 157 |
| 15 | | Instituto Nacional de Salud Pública | Morelos | Environmental Science | 47 | 9.682 | 125 | 226 |
| 16 | | Instituto Nacional de Salud Pública | Morelos | Environmental Science | 46 | 7.342 | 128 | 244 |
| 17 | | Universidad Autónoma del Estado de Morelos | Morelos | Biochemistry, Genetics and Molecular Biology | 46 | 6.862 | 111 | 175 |
| 18 | | Instituto Nacional de Salud Pública | Morelos | Medicine | 42 | 10.801 | 75 | 136 |
| 19 | | Instituto Nacional de Salud Pública | Morelos | Medicine | 41 | 99.711 | 104 | 212 |
| 20 | | Instituto Nacional de Salud Pública | Morelos | Medicine | 41 | 5.891 | 90 | 143 |
| 21 | | Universidad Autónoma del Estado de Morelos | Morelos | Materials Science | 40 | 6.021 | 159 | 561 |
| 22 | | Universidad del Sol | Morelos | Nursing | 38 | 4.471 | 107 | 181 |
| 23 | | Universidad Autónoma del Estado de Morelos | Morelos | Physics and Astronomy | 37 | 5.576 | 172 | 363 |
| 24 | | Universidad Americana de Morelos | Morelos | Medicine | 37 | 4.489 | 70 | 106 |
| 25 | | Universidad Autónoma del Estado de Morelos | Morelos | Biochemistry, Genetics and Molecular Biology | 36 | 4.915 | 68 | 124 |
| 26 | | Universidad Autónoma del Estado de Morelos | Morelos | Chemistry | 36 | 4.366 | 96 | 196 |
| 27 | | Universidad Autónoma del Estado de Morelos | Morelos | Medicine | 36 | 3.835 | 92 | 167 |
| 28 | | Instituto Nacional de Salud Pública | Morelos | Medicine | 35 | 50.724 | 57 | 108 |
| 29 | | Instituto Nacional de Salud Pública | Morelos | Biochemistry, Genetics and Molecular Biology | 34 | 10.293 | 70 | 134 |
| 30 | | Instituto Nacional de Salud Pública | Morelos | Environmental Science | 34 | 5.862 | 76 | 209 |
| 31 | | Universidad Autónoma del Estado de Morelos | Morelos | Agricultural and Biological Sciences | 34 | 3.665 | 75 | 168 |
| 32 | | Instituto Nacional de Salud Pública | Morelos | Medicine | 33 | 23.256 | 64 | 110 |
| 33 | | Instituto Nacional de Salud Pública | Morelos | Environmental Science | 33 | 8.405 | 51 | 97 |
| 34 | | Instituto Nacional de Salud Pública | Morelos | Medicine | 33 | 4.743 | 78 | 176 |
| 35 | | Universidad Autónoma del Estado de Morelos | Morelos | Agricultural and Biological Sciences | 33 | 3.579 | 68 | 118 |
| 36 | | Universidad del Sol | Morelos | Neuroscience | 33 | 3.032 | 87 | 146 |
| 37 | | Instituto Nacional de Salud Pública | Morelos | Health Professions | 32 | 21.701 | 54 | 93 |
| 38 | | Universidad Autónoma del Estado de Morelos | Morelos | Materials Science | 32 | 4.089 | 95 | 216 |
| 39 | | Universidad Autónoma del Estado de Morelos | Morelos | Engineering | 32 | 3.604 | 90 | 180 |
| 40 | | Universidad Americana de Morelos | Morelos | Materials Science | 32 | 3.484 | 85 | 261 |
| 41 | | Centro Nacional de Investigación y Desarrollo Tecnológico | Morelos | Mathematics | 32 | 3.369 | 77 | 122 |
| 42 | | Universidad Autónoma del Estado de Morelos | Morelos | Environmental Science | 32 | 3.273 | 73 | 126 |
| 43 | | Instituto Nacional de Salud Pública | Morelos | Environmental Science | 31 | 19.243 | 55 | 149 |
| 44 | | Universidad Autónoma del Estado de Morelos | Morelos | Biochemistry, Genetics and Molecular Biology | 31 | 5.038 | 52 | 85 |
| 45 | | Universidad Autónoma del Estado de Morelos | Morelos | Materials Science | 31 | 3.526 | 106 | 253 |
| 46 | | Universidad Autónoma del Estado de Morelos | Morelos | Veterinary | 31 | 3.343 | 98 | 185 |
| 47 | | Instituto Nacional de Salud Pública | Morelos | Medicine | 31 | 3.255 | 70 | 140 |
| 48 | | Universidad Autónoma del Estado de Morelos | Morelos | Biochemistry, Genetics and Molecular Biology | 31 | 2.726 | 43 | 62 |
| 49 | | Instituto Nacional de Salud Pública | Morelos | Biochemistry, Genetics and Molecular Biology | 31 | 2.698 | 71 | 109 |
| 50 | | Universidad Autónoma del Estado de Morelos | Morelos | Engineering | 31 | 2.371 | 52 | 88 |